Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase | APR52_28730 | O31713 | Negative | 6228208 - 6228984 | 27627.6 |
| phospholipase c, phosphocholine-specific | APR52_28735 | P15713 | Negative | 6229057 - 6231171 | 76108.0 |
| hypothetical protein | APR52_28740 | Not Available | Negative | 6231183 - 6231425 | 7680.31 |
| hypothetical protein | APR52_28745 | Not Available | Negative | 6231438 - 6233498 | 70376.0 |
| atpase | APR52_28750 | Not Available | Negative | 6233757 - 6234293 | 19938.7 |
| arsr family transcriptional regulator | APR52_28755 | Not Available | Negative | 6234329 - 6234682 | 12842.3 |
| class a beta-lactamase | APR52_28760 | Q01166 | Positive | 6234861 - 6235748 | 30859.9 |
| transporter | APR52_28765 | Not Available | Positive | 6235894 - 6237123 | 42109.6 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | APR52_28770 | O51428 | Positive | 6237163 - 6238464 | 47188.9 |
| hemolysin d | APR52_28775 | P54176 | Negative | 6238474 - 6239094 | 22153.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
