Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ala-xaa dipeptidase | APR52_28675 | Not Available | Positive | 6215898 - 6217643 | 61673.2 |
| merr family transcriptional regulator | APR52_28685 | Not Available | Negative | 6218167 - 6218481 | 11403.7 |
| cytochrome c biogenesis protein | APR52_28690 | A9KE65 | Negative | 6218483 - 6219445 | 34978.2 |
| phosphoglycerate mutase | APR52_28695 | Not Available | Negative | 6219496 - 6220149 | 22540.8 |
| aculeacin a acylase | APR52_28700 | Not Available | Negative | 6220206 - 6222593 | 84406.6 |
| glutathione s-transferase | APR52_28705 | P04907 | Negative | 6222707 - 6223288 | 21719.3 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | APR52_28710 | O94584 | Negative | 6223318 - 6223950 | 22387.3 |
| transcriptional regulator | APR52_28715 | Not Available | Negative | 6224044 - 6225030 | 35574.4 |
| porin | APR52_28720 | P25184 | Positive | 6225119 - 6227311 | 79575.3 |
| glutamine amidotransferase | APR52_28725 | Q9Y933 | Negative | 6227453 - 6228187 | 26096.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
