Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR52_28625 | P52685 | Negative | 6205111 - 6206010 | 32973.8 |
| methylmalonate-semialdehyde dehydrogenase | APR52_28630 | Q02252 | Positive | 6206264 - 6207787 | 53982.2 |
| hypothetical protein | APR52_28635 | Not Available | Positive | 6207784 - 6208182 | 14512.3 |
| acyl-coa dehydrogenase | APR52_28640 | Q9UKU7 | Positive | 6208179 - 6209333 | 41008.7 |
| enoyl-coa hydratase | APR52_28645 | Q58EB4 | Positive | 6209362 - 6210477 | 40380.5 |
| 3-hydroxyisobutyrate dehydrogenase | APR52_28650 | P28811 | Positive | 6210505 - 6211398 | 29847.4 |
| murein transglycosylase | APR52_28655 | Not Available | Positive | 6211826 - 6213073 | 44463.4 |
| 2-alkenal reductase | APR52_28660 | Not Available | Negative | 6213087 - 6214169 | 37692.3 |
| hypothetical protein | APR52_28665 | Not Available | Positive | 6214343 - 6215203 | 29788.5 |
| alpha/beta hydrolase | APR52_28670 | Not Available | Positive | 6215403 - 6215744 | 11320.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
