Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | APR52_28575 | Not Available | Negative | 6194769 - 6195371 | 22178.9 |
| succinyl-coa--3-ketoacid-coa transferase | APR52_28580 | B0RVK4 | Positive | 6195467 - 6196267 | 27947.7 |
| succinyl-coa--3-ketoacid-coa transferase | APR52_28585 | B0RVK3 | Positive | 6196269 - 6196907 | 22488.6 |
| carnitine dehydratase | APR52_28590 | P96877 | Positive | 6196985 - 6198370 | 48318.7 |
| aspartate aminotransferase | APR52_28595 | Q7T3E5 | Negative | 6198367 - 6199533 | 41754.5 |
| hypothetical protein | APR52_28600 | Not Available | Negative | 6199589 - 6200770 | 42544.1 |
| laci family transcriptional regulator | APR52_28605 | Not Available | Negative | 6200784 - 6201767 | 34089.5 |
| cysteine desulfurase | APR52_28610 | Not Available | Negative | 6201794 - 6203041 | 44524.0 |
| dihydrodipicolinate synthetase | APR52_28615 | A2SQU8 | Negative | 6203022 - 6203969 | 33899.7 |
| transcriptional regulator | APR52_28620 | Not Available | Positive | 6204146 - 6205114 | 35351.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
