Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional activator of acetoin/glycerol metabolism | APR52_28525 | P28614 | Negative | 6182669 - 6184576 | 68364.0 |
| aldehyde dehydrogenase | APR52_28530 | P46368 | Positive | 6184813 - 6186333 | 55836.8 |
| acetaldehyde dehydrogenase | APR52_28535 | Not Available | Positive | 6186414 - 6186803 | 14239.0 |
| hypothetical protein | APR52_28540 | Not Available | Positive | 6186923 - 6188269 | 48988.9 |
| transcriptional regulator | APR52_28545 | P44418 | Positive | 6188292 - 6189215 | 33485.6 |
| transporter | APR52_28550 | P45183 | Positive | 6189331 - 6189540 | 7075.63 |
| hypothetical protein | APR52_28555 | Not Available | Negative | 6189568 - 6190035 | 17539.7 |
| rna polymerase subunit sigma | APR52_28560 | Not Available | Positive | 6190572 - 6191126 | 20580.5 |
| hypothetical protein | APR52_28565 | Not Available | Positive | 6191209 - 6192267 | 38201.0 |
| ligand-gated channel protein | APR52_28570 | Not Available | Positive | 6192552 - 6194756 | 80167.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
