Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkylhydroperoxidase | APR52_28470 | Not Available | Negative | 6170885 - 6171463 | 21756.2 |
| ethanolamine ammonia-lyase | APR52_28475 | C1DNK9 | Negative | 6171514 - 6172299 | 27778.2 |
| ethanolamine ammonia-lyase | APR52_28480 | P0AEJ7 | Negative | 6172296 - 6173690 | 49852.8 |
| ethanolamine permease | APR52_28485 | P0AA48 | Negative | 6173698 - 6175125 | 50431.3 |
| peptidylprolyl isomerase | APR52_28490 | O08437 | Positive | 6175256 - 6175666 | 14330.2 |
| oxidoreductase | APR52_28495 | O31680 | Negative | 6175670 - 6176431 | 26378.7 |
| glucan biosynthesis protein d | APR52_28500 | Q8XT53 | Negative | 6176605 - 6178203 | 58968.8 |
| poly(3-hydroxyalkanoate) synthetase | APR52_28505 | Not Available | Negative | 6178526 - 6179317 | 28690.7 |
| molybdopterin-binding oxidoreductase | APR52_28510 | Not Available | Positive | 6179641 - 6180582 | 31561.5 |
| nitroreductase | APR52_28520 | Not Available | Negative | 6181656 - 6182558 | 32667.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
