Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_28420 | Q01198 | Negative | 6159512 - 6160417 | 32033.5 |
| hypothetical protein | APR52_28425 | Not Available | Positive | 6161012 - 6162043 | 37993.0 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | APR52_28430 | Not Available | Negative | 6162175 - 6163878 | 62177.4 |
| short-chain dehydrogenase | APR52_28435 | Not Available | Positive | 6164017 - 6164799 | 27351.1 |
| transporter | APR52_28440 | Not Available | Positive | 6164859 - 6165707 | 29695.9 |
| thioesterase | APR52_28445 | Not Available | Positive | 6165704 - 6166126 | 15996.3 |
| histidine kinase | APR52_28450 | Not Available | Negative | 6166143 - 6167507 | 50121.5 |
| two-component system response regulator | APR52_28455 | P36556 | Negative | 6167511 - 6168179 | 24583.6 |
| phosphoesterase | APR52_28460 | Not Available | Positive | 6168344 - 6169042 | 25568.4 |
| sulfatase | APR52_28465 | A0A0R6L508 | Positive | 6169100 - 6170854 | 64349.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
