Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_28260 | Not Available | Negative | 6118038 - 6118220 | 6638.96 |
| pyridoxamine 5'-phosphate oxidase | APR52_28265 | Not Available | Negative | 6118381 - 6119004 | 22623.2 |
| mfs transporter | APR52_28270 | Not Available | Negative | 6119001 - 6120203 | 41673.7 |
| lysr family transcriptional regulator | APR52_28275 | Not Available | Positive | 6120282 - 6121184 | 32975.9 |
| mfs transporter | APR52_28280 | Not Available | Positive | 6121248 - 6122483 | 41820.5 |
| hypothetical protein | APR52_28285 | Not Available | Negative | 6122476 - 6122868 | 15064.5 |
| gntr family transcriptional regulator | APR52_28295 | Not Available | Positive | 6124737 - 6126221 | 54682.7 |
| hypothetical protein | APR52_28300 | P55440 | Positive | 6126318 - 6128621 | 83460.4 |
| cysteine methyltransferase | APR52_28305 | Q9ZET8 | Negative | 6128566 - 6129108 | 19366.3 |
| mfs transporter | APR52_28310 | Not Available | Negative | 6129105 - 6130316 | 41087.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
