Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine decarboxylase | APR52_02150 | Q9I2S7 | Positive | 452222 - 454519 | 86308.0 |
| atp-dependent dna ligase | APR52_02155 | P44121 | Negative | 454558 - 455397 | 30700.2 |
| enoyl-acp reductase | APR52_02160 | Q9K151 | Negative | 455539 - 456321 | 27494.8 |
| peptide abc transporter substrate-binding protein | APR52_02165 | P33913 | Positive | 456360 - 458159 | 66675.3 |
| microcin abc transporter permease | APR52_02170 | P0AFU1 | Positive | 458201 - 459235 | 38439.8 |
| peptide abc transporter permease | APR52_02175 | P33915 | Positive | 459240 - 460298 | 39083.0 |
| microcin abc transporter atp-binding protein | APR52_02180 | P33916 | Positive | 460295 - 461941 | 58978.7 |
| mfs transporter | APR52_02185 | P39381 | Positive | 461982 - 463202 | 41715.6 |
| ribosome maturation protein rimp | APR52_02190 | C5CLW1 | Positive | 463474 - 464118 | 23339.7 |
| transcription elongation factor nusa | APR52_02195 | P0AFF8 | Positive | 464135 - 465619 | 54950.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
