Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | APR52_28210 | P39886 | Negative | 6106281 - 6107837 | 52719.8 |
| hypothetical protein | APR52_28215 | Not Available | Negative | 6107914 - 6108549 | 21710.9 |
| mammalian cell entry protein | APR52_28220 | P43671 | Negative | 6108546 - 6110198 | 60771.9 |
| paraquat-inducible protein a | APR52_28225 | P0AFM0 | Negative | 6110195 - 6110908 | 25886.8 |
| paraquat-inducible protein a | APR52_28230 | Not Available | Negative | 6110905 - 6111543 | 22812.6 |
| multidrug mfs transporter | APR52_28235 | Not Available | Negative | 6111564 - 6113003 | 49206.4 |
| mfs transporter | APR52_28240 | P28246 | Negative | 6113003 - 6114196 | 40802.9 |
| monooxygenase | APR52_28245 | P54950 | Negative | 6114292 - 6115587 | 47842.5 |
| glucose 1-dehydrogenase | APR52_28250 | Not Available | Negative | 6115640 - 6116371 | 25086.7 |
| hypothetical protein | APR52_28255 | Not Available | Positive | 6116732 - 6118030 | 47350.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
