Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_28160 | Not Available | Positive | 6093486 - 6094523 | 38284.0 |
| luxr family transcriptional regulator | APR52_28165 | Q4L8Q6 | Positive | 6094540 - 6095172 | 23159.5 |
| hypothetical protein | APR52_28170 | Not Available | Positive | 6095352 - 6097757 | 82799.6 |
| amidohydrolase | APR52_28175 | A6XIG7 | Negative | 6097773 - 6098600 | 30475.5 |
| hydroxyacid dehydrogenase | APR52_28180 | O04130 | Negative | 6098629 - 6099630 | 35078.1 |
| laci family transcriptional regulator | APR52_28185 | B6EH86 | Negative | 6099663 - 6100703 | 37543.2 |
| c4-dicarboxylate abc transporter permease | APR52_28190 | Q312S1 | Negative | 6100753 - 6102600 | 65245.3 |
| c4-dicarboxylate abc transporter substrate-binding protein | APR52_28195 | Not Available | Negative | 6102702 - 6103742 | 37858.9 |
| hypothetical protein | APR52_28200 | Not Available | Positive | 6104098 - 6104625 | 19107.5 |
| hypothetical protein | APR52_28205 | Not Available | Negative | 6104650 - 6106092 | 51024.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
