Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_28110 | Not Available | Positive | 6081180 - 6081749 | 20692.5 |
| mate family efflux transporter | APR52_28115 | Not Available | Positive | 6081746 - 6083158 | 49539.5 |
| 3-demethylubiquinone-9 3-methyltransferase | APR52_28120 | Not Available | Negative | 6083162 - 6083638 | 17693.4 |
| hypothetical protein | APR52_28125 | A3Q5L8 | Negative | 6083724 - 6085127 | 50864.7 |
| two-component system response regulator | APR52_28130 | Q8GP20 | Negative | 6085124 - 6085780 | 23654.8 |
| hypothetical protein | APR52_28135 | V5YMB3 | Positive | 6085899 - 6087950 | 74918.8 |
| ligand-gated channel protein | APR52_28140 | P06971 | Negative | 6087954 - 6090170 | 80496.2 |
| hypothetical protein | APR52_28145 | Not Available | Negative | 6090469 - 6091515 | 38039.3 |
| rna polymerase subunit sigma | APR52_28150 | Not Available | Negative | 6091604 - 6092107 | 18494.0 |
| hypothetical protein | APR52_28155 | Q4WBW4 | Positive | 6092349 - 6093458 | 40282.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
