Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfoxide reductase catalytic subunit yedy | APR52_27900 | Q8XV50 | Negative | 6035902 - 6036912 | 37488.9 |
| cytochrome c assembly protein | APR52_27905 | P56315 | Negative | 6037031 - 6038347 | 48966.2 |
| cytochrome c biogenesis protein resb | APR52_27910 | P73912 | Negative | 6038344 - 6040518 | 78663.1 |
| cytochrome c | APR52_27915 | Q52369 | Negative | 6040654 - 6041337 | 23744.3 |
| gtp-binding protein | APR52_27920 | Q21TK4 | Positive | 6041409 - 6042146 | 26858.4 |
| alpha/beta hydrolase | APR52_27925 | G5EBI4 | Positive | 6042221 - 6043129 | 33332.0 |
| lipid a biosynthesis acyltransferase | APR52_27930 | P0ACV1 | Negative | 6043119 - 6044003 | 32815.0 |
| lipid a biosynthesis acyltransferase | APR52_27935 | Not Available | Negative | 6044000 - 6044896 | 32613.9 |
| s-adenosylmethionine synthetase | APR52_27940 | C5CQF1 | Positive | 6045118 - 6046299 | 42988.9 |
| hypothetical protein | APR52_27945 | Not Available | Negative | 6046313 - 6047752 | 52926.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
