Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR52_27795 | P64608 | Negative | 6010727 - 6011509 | 27859.6 |
| abc transporter atp-binding protein | APR52_27800 | P45031 | Negative | 6011506 - 6012333 | 29670.7 |
| glutamate synthase | APR52_27805 | P9WN18 | Negative | 6012506 - 6013984 | 53704.1 |
| glutamate synthase | APR52_27810 | P55037 | Negative | 6014024 - 6018778 | 172678.0 |
| transposase | APR52_27815 | Not Available | Negative | 6018962 - 6019657 | 25856.9 |
| sam-dependent methyltransferase | APR52_27820 | Not Available | Negative | 6019810 - 6020718 | 33354.2 |
| peptidase | APR52_27825 | Not Available | Negative | 6020715 - 6021290 | 20727.3 |
| mfs transporter | APR52_27830 | Not Available | Negative | 6021287 - 6022552 | 42821.3 |
| deoxyguanosinetriphosphate triphosphohydrolase | APR52_27835 | Q8XV63 | Negative | 6022549 - 6023700 | 43041.9 |
| 3-dehydroquinate synthase | APR52_27840 | A9ADP0 | Negative | 6023738 - 6024859 | 39513.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
