Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase | APR52_27745 | C5CQI9 | Negative | 6002531 - 6003172 | 23019.2 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | APR52_27750 | C5CQI8 | Negative | 6003169 - 6004464 | 45880.9 |
| bola family transcriptional regulator | APR52_27755 | P0A9W7 | Negative | 6004511 - 6004753 | 9049.73 |
| metal-dependent hydrolase | APR52_27760 | P0AFN8 | Negative | 6004773 - 6005537 | 27924.9 |
| abc transporter atp-binding protein | APR52_27765 | P36879 | Negative | 6005534 - 6006481 | 34740.1 |
| serine hydrolase | APR52_27770 | Not Available | Positive | 6006642 - 6008225 | 56898.5 |
| anti-anti-sigma factor | APR52_27775 | Not Available | Negative | 6008253 - 6008528 | 9404.61 |
| hypothetical protein | APR52_27780 | Not Available | Negative | 6008563 - 6009225 | 24066.1 |
| abc transporter | APR52_27785 | Q1RGV2 | Negative | 6009422 - 6010201 | 28422.5 |
| outer membrane lipid asymmetry maintenance protein mlad | APR52_27790 | P64605 | Negative | 6010198 - 6010686 | 17377.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
