Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter permease lptf | APR52_02100 | Not Available | Negative | 444421 - 445557 | 41559.7 |
| aminopeptidase | APR52_02105 | C5CLU5 | Positive | 445579 - 447126 | 52885.4 |
| dna polymerase iii subunit chi | APR52_02110 | Not Available | Positive | 447123 - 447566 | 16362.4 |
| hypothetical protein | APR52_02115 | Not Available | Positive | 447566 - 447985 | 14832.6 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_02120 | Not Available | Positive | 448135 - 449343 | 41788.1 |
| hypothetical protein | APR52_02125 | Not Available | Negative | 449451 - 449840 | 14235.0 |
| hypothetical protein | APR52_02130 | Not Available | Negative | 449980 - 450342 | 12719.7 |
| Trna-ser | Not Available | Not Available | Positive | 450482 - 450572 | Not Available |
| stomatin 2 | APR52_02140 | Q99JB2 | Negative | 450618 - 451550 | 33780.7 |
| hypothetical protein | APR52_02145 | Not Available | Negative | 451585 - 452010 | 15018.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
