Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd transporter | APR52_27645 | Not Available | Negative | 5970732 - 5973935 | 113502.0 |
| gcn5 family acetyltransferase | APR52_27650 | Not Available | Negative | 5974163 - 5974726 | 20642.0 |
| hypothetical protein | APR52_27655 | Not Available | Positive | 5975041 - 5975676 | 21609.2 |
| hypothetical protein | APR52_27660 | Not Available | Positive | 5975833 - 5978784 | 98626.0 |
| hypothetical protein | APR52_27665 | Not Available | Positive | 5979035 - 5986171 | 248422.0 |
| hypothetical protein | APR52_27670 | Not Available | Positive | 5986709 - 5990236 | 120263.0 |
| 6-phosphogluconate dehydrogenase | APR52_27675 | P80859 | Negative | 5990276 - 5991703 | 51793.3 |
| arac family transcriptional regulator | APR52_27680 | Not Available | Positive | 5991905 - 5992921 | 36514.6 |
| salicylate esterase | APR52_27685 | Not Available | Positive | 5993000 - 5993737 | 26938.1 |
| 3'-5' exonuclease | APR52_27690 | Not Available | Negative | 5993738 - 5994349 | 22488.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
