Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phthalate 4,5-dioxygenase | APR52_27595 | G2IN04 | Positive | 5961166 - 5962503 | 51053.4 |
| 4,5-dioxygenase | APR52_27600 | Not Available | Negative | 5962483 - 5962830 | 13037.4 |
| hypothetical protein | APR52_27605 | Not Available | Negative | 5962859 - 5963497 | 24687.7 |
| polyketide cyclase | APR52_27610 | Not Available | Negative | 5963494 - 5964570 | 40038.3 |
| methyltransferase type 11 | APR52_27615 | Not Available | Negative | 5964611 - 5965543 | 34735.5 |
| thiol-disulfide oxidoreductase | APR52_27620 | Not Available | Negative | 5965580 - 5966011 | 15047.4 |
| marr family transcriptional regulator | APR52_27625 | Not Available | Negative | 5966075 - 5966662 | 22121.5 |
| radical sam protein | APR52_27630 | P9WL78 | Positive | 5966785 - 5967882 | 40924.9 |
| rnd transporter | APR52_27635 | Q849R1 | Negative | 5967833 - 5969326 | 52386.1 |
| rnd transporter mfp subunit | APR52_27640 | P43505 | Negative | 5969329 - 5970612 | 45147.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
