Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | APR52_27495 | Not Available | Negative | 5940532 - 5941677 | 42258.4 |
| class d beta-lactamase | APR52_27500 | P0A3M4 | Negative | 5941674 - 5942483 | 29679.3 |
| glyoxalase | APR52_27505 | Not Available | Negative | 5942595 - 5942966 | 13344.9 |
| dna-binding protein | APR52_27510 | Not Available | Negative | 5943001 - 5943723 | 26537.2 |
| phospholipase | APR52_27515 | Not Available | Negative | 5943735 - 5945360 | 59523.4 |
| abc transporter substrate-binding protein | APR52_27520 | Not Available | Negative | 5945428 - 5946414 | 34134.8 |
| adenosine deaminase | APR52_27525 | Q8XXL5 | Negative | 5946423 - 5947538 | 41419.1 |
| lysr family transcriptional regulator | APR52_27530 | Not Available | Positive | 5947615 - 5948628 | 36603.7 |
| hypothetical protein | APR52_27535 | Not Available | Positive | 5948700 - 5949068 | 12776.3 |
| hypothetical protein | APR52_27540 | Not Available | Positive | 5949224 - 5949847 | 23006.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
