Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR52_27445 | Q9SD07 | Negative | 5927414 - 5929540 | 77111.0 |
| abc transporter substrate-binding protein | APR52_27450 | Not Available | Negative | 5929563 - 5930588 | 35754.1 |
| abc transporter permease | APR52_27455 | P0AGI3 | Negative | 5930683 - 5931660 | 33768.4 |
| hypothetical protein | APR52_27460 | Not Available | Negative | 5931678 - 5933270 | 57046.1 |
| transcriptional regulator | APR52_27465 | Not Available | Negative | 5934153 - 5934869 | 26867.2 |
| short-chain dehydrogenase | APR52_27470 | Not Available | Positive | 5935084 - 5935869 | 28306.8 |
| aspartate aminotransferase | APR52_27475 | Q82DR2 | Positive | 5935881 - 5937014 | 41633.7 |
| alpha/beta hydrolase | APR52_27480 | P23974 | Positive | 5937028 - 5937909 | 32140.4 |
| allantoate amidohydrolase | APR52_27485 | Q6DTN4 | Positive | 5937906 - 5939156 | 43545.0 |
| mfs transporter | APR52_27490 | Q88FY6 | Positive | 5939182 - 5940498 | 47460.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
