Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_27395 | A1WPD7 | Positive | 5916834 - 5918045 | 44247.9 |
| hypothetical protein | APR52_27400 | Not Available | Negative | 5918055 - 5918399 | 12961.7 |
| thioredoxin | APR52_27405 | Not Available | Positive | 5918501 - 5918896 | 14045.8 |
| epimerase | APR52_27410 | Not Available | Positive | 5918943 - 5919614 | 24129.6 |
| alpha/beta hydrolase | APR52_27415 | Not Available | Negative | 5919627 - 5920436 | 28642.4 |
| hypothetical protein | APR52_27420 | Not Available | Negative | 5920486 - 5922741 | 82767.6 |
| o-acetylhomoserine aminocarboxypropyltransferase | APR52_27425 | P94890 | Negative | 5922830 - 5924137 | 46272.2 |
| hypothetical protein | APR52_27430 | Not Available | Positive | 5924284 - 5924733 | 16708.5 |
| abc transporter atp-binding protein | APR52_27435 | Q5KUX3 | Negative | 5924761 - 5926245 | 54144.2 |
| strictosidine synthase | APR52_27440 | Not Available | Negative | 5926311 - 5927414 | 38526.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
