Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconolaconase | APR52_27345 | Not Available | Positive | 5903477 - 5904406 | 32467.4 |
| hypothetical protein | APR52_27350 | D2D3B6 | Positive | 5904724 - 5906103 | 48823.8 |
| hypothetical protein | APR52_27355 | Not Available | Negative | 5906171 - 5906926 | 28192.5 |
| dmso reductase | APR52_27360 | D3RNN6 | Negative | 5907033 - 5907965 | 33569.1 |
| hypothetical protein | APR52_27365 | D3RNN7 | Negative | 5907971 - 5908597 | 22974.1 |
| formate dehydrogenase | APR52_27370 | D3RNN8 | Negative | 5908747 - 5911686 | 108745.0 |
| transcriptional regulator | APR52_27375 | Not Available | Positive | 5911769 - 5912710 | 33617.3 |
| acetate kinase | APR52_27380 | Q6N143 | Negative | 5912707 - 5913897 | 41278.3 |
| sulfoacetaldehyde acetyltransferase | APR52_27385 | Q84H41 | Negative | 5913914 - 5915725 | 65514.0 |
| iclr family transcriptional regulator | APR52_27390 | Not Available | Positive | 5915910 - 5916731 | 29558.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
