Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid transporter | APR52_02050 | Not Available | Negative | 431114 - 431749 | 22058.6 |
| n-acetylglutamate synthase | APR52_02055 | Q8XZZ5 | Negative | 431781 - 433127 | 49414.5 |
| peptidase m41 | APR52_02060 | Not Available | Negative | 433171 - 435177 | 73910.8 |
| atp-dependent helicase | APR52_02065 | P43329 | Positive | 435591 - 439454 | 143953.0 |
| hypothetical protein | APR52_02070 | Not Available | Negative | 439815 - 440282 | 16627.0 |
| rard protein | APR52_02075 | Not Available | Negative | 440299 - 440685 | 13656.3 |
| aminotransferase | APR52_02080 | P77806 | Negative | 440723 - 441892 | 42419.1 |
| transcriptional regulator | APR52_02085 | B4E8V9 | Negative | 441936 - 442877 | 34976.3 |
| cobalamin biosynthesis protein cbix | APR52_02090 | Not Available | Negative | 442941 - 443315 | 13196.0 |
| lps export abc transporter permease lptg | APR52_02095 | Not Available | Negative | 443315 - 444424 | 41513.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
