Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monooxygenase | APR52_27185 | P54989 | Positive | 5870728 - 5872086 | 48868.9 |
| hypothetical protein | APR52_27190 | Not Available | Negative | 5872130 - 5872501 | 13056.1 |
| metal abc transporter substrate-binding protein | APR52_27195 | Q08870 | Negative | 5872531 - 5873355 | 29880.1 |
| methionine abc transporter atp-binding protein | APR52_27200 | Q9KTJ6 | Negative | 5873404 - 5874066 | 23458.6 |
| abc transporter atp-binding protein | APR52_27205 | Q39IE7 | Negative | 5874059 - 5874952 | 32410.9 |
| metal abc transporter substrate-binding protein | APR52_27210 | Not Available | Positive | 5875237 - 5876058 | 29033.1 |
| peptide chain release factor 2 | APR52_27215 | C5CUX0 | Positive | 5876502 - 5877344 | 31294.6 |
| haloacid dehalogenase | APR52_27220 | P77475 | Positive | 5877394 - 5878080 | 24769.6 |
| aminopeptidase | APR52_27225 | Q8H0S9 | Positive | 5878064 - 5880781 | 100350.0 |
| fructose 1,6-bisphosphatase | APR52_27230 | A9BW85 | Positive | 5880825 - 5881838 | 37466.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
