Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-succinylhomoserine sulfhydrylase | APR52_27085 | P55218 | Negative | 5853620 - 5854861 | 43855.6 |
| amidophosphoribosyltransferase | APR52_27090 | Q51342 | Negative | 5854882 - 5856381 | 54581.5 |
| colicin v synthesis protein | APR52_27095 | Not Available | Negative | 5856394 - 5856879 | 17042.3 |
| sporulation protein | APR52_27100 | Not Available | Negative | 5856902 - 5857792 | 30685.7 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | APR52_27105 | P08192 | Negative | 5857886 - 5859184 | 46881.5 |
| arsc family transcriptional regulator | APR52_27110 | P24178 | Positive | 5859208 - 5859591 | 14224.9 |
| hypothetical protein | APR52_27115 | Not Available | Positive | 5859726 - 5860358 | 22399.9 |
| hypothetical protein | APR52_27120 | Q5P0Z5 | Positive | 5860488 - 5860811 | 11202.1 |
| argininosuccinate synthase | APR52_27125 | C5CUG9 | Positive | 5860832 - 5862172 | 49406.0 |
| hypothetical protein | APR52_27130 | Not Available | Negative | 5862245 - 5863084 | 29851.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
