Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron dicitrate transport regulator fecr | APR52_27035 | Not Available | Negative | 5846857 - 5847111 | 9554.88 |
| rna polymerase subunit sigma-70 | APR52_27040 | Not Available | Negative | 5847229 - 5847753 | 19511.6 |
| plasmid replication/partition related protein | APR52_27045 | Not Available | Positive | 5848148 - 5848987 | 30124.4 |
| twin-arginine translocation pathway signal | APR52_27050 | Not Available | Negative | 5849010 - 5849594 | 19635.2 |
| dehydrogenase | APR52_27055 | Q8A945 | Negative | 5849710 - 5850471 | 26641.8 |
| arac family transcriptional regulator | APR52_27060 | P35319 | Positive | 5850535 - 5851467 | 33490.5 |
| Trna-asp | Not Available | Not Available | Positive | 5851792 - 5851868 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 5851938 - 5852013 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 5852069 - 5852144 | Not Available |
| glutamyl-q trna(asp) ligase | APR52_27080 | Q21V06 | Negative | 5852217 - 5853608 | 51457.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
