Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug dmt transporter permease | APR52_26975 | Not Available | Positive | 5824895 - 5825839 | 33282.0 |
| 3-oxoacyl-acp reductase | APR52_26980 | Not Available | Positive | 5825881 - 5826681 | 27184.5 |
| hypothetical protein | APR52_26990 | Not Available | Negative | 5829110 - 5830015 | 32624.9 |
| quinone oxidoreductase | APR52_26995 | Not Available | Positive | 5830122 - 5831105 | 34718.1 |
| hypothetical protein | APR52_27000 | Not Available | Positive | 5831237 - 5831692 | 16668.8 |
| bile acid:sodium symporter | APR52_27005 | P39879 | Positive | 5831764 - 5832783 | 35944.3 |
| polyketide synthase | APR52_27015 | Q7TXL6 | Negative | 5835697 - 5840259 | 160349.0 |
| non-ribosomal peptide synthetase | APR52_27020 | Not Available | Negative | 5840259 - 5845574 | 191565.0 |
| thioesterase | APR52_27025 | Q70LM8 | Negative | 5845677 - 5846366 | 25620.6 |
| antibiotic synthesis protein mbth | APR52_27030 | Not Available | Negative | 5846426 - 5846680 | 9533.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
