Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dnaase | APR52_26925 | P39408 | Positive | 5814247 - 5815107 | 31306.6 |
| hypothetical protein | APR52_26930 | Not Available | Positive | 5815262 - 5815720 | 15720.5 |
| dna-deoxyinosine glycosylase | APR52_26935 | Not Available | Positive | 5815845 - 5816399 | 20130.0 |
| spermidine synthase | APR52_26940 | Q7NQK7 | Positive | 5816404 - 5817183 | 29182.0 |
| type ii secretion system protein e | APR52_26945 | Q6FA79 | Positive | 5817188 - 5818978 | 65949.0 |
| hypothetical protein | APR52_26950 | Not Available | Positive | 5819139 - 5819624 | 17068.8 |
| hypothetical protein | APR52_26955 | P70795 | Positive | 5819638 - 5821149 | 52873.2 |
| lysr family transcriptional regulator | APR52_26960 | Not Available | Negative | 5821229 - 5822152 | 33455.0 |
| mfs transporter | APR52_26965 | Not Available | Positive | 5822252 - 5823235 | 34421.6 |
| gamma-glutamyltransferase | APR52_26970 | P15557 | Positive | 5823259 - 5824872 | 57598.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
