Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin amidase | APR52_26875 | P06875 | Negative | 5803398 - 5805863 | 89036.4 |
| phenylacetate--coa ligase | APR52_26880 | Q9L9C1 | Negative | 5805896 - 5807206 | 48015.5 |
| phenylacetic acid degradation protein | APR52_26885 | P76084 | Negative | 5807237 - 5807677 | 15748.7 |
| enoyl-coa hydratase | APR52_26890 | Not Available | Negative | 5807681 - 5808484 | 27436.3 |
| phenylacetic acid degradation protein paay | APR52_26895 | B5F748 | Positive | 5808650 - 5809252 | 21274.9 |
| tetr family transcriptional regulator | APR52_26900 | Not Available | Positive | 5809305 - 5809940 | 23542.2 |
| abc transporter atp-binding protein | APR52_26905 | B8ZS82 | Negative | 5809963 - 5811000 | 37193.5 |
| atpase | APR52_26910 | P9WLX4 | Negative | 5811056 - 5812057 | 37605.2 |
| atpase | APR52_26915 | Not Available | Negative | 5812084 - 5813103 | 37035.0 |
| peptidase s1 | APR52_26920 | P45129 | Negative | 5813147 - 5814133 | 33871.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
