Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | APR52_26825 | Not Available | Negative | 5792441 - 5794501 | 72387.6 |
| abc transporter atp-binding protein | APR52_26830 | Not Available | Negative | 5794643 - 5795386 | 27258.5 |
| hypothetical protein | APR52_26835 | Not Available | Negative | 5795383 - 5797251 | 65905.5 |
| abc transporter permease | APR52_26840 | Not Available | Negative | 5797296 - 5798324 | 36034.2 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_26845 | Not Available | Negative | 5798439 - 5799584 | 40026.4 |
| phenylacetic acid degradation protein | APR52_26850 | P76081 | Negative | 5799630 - 5800724 | 39901.7 |
| phenylacetate-coa oxygenase | APR52_26855 | P76080 | Negative | 5800736 - 5801254 | 18504.1 |
| phenylacetic acid degradation protein | APR52_26860 | P76079 | Negative | 5801266 - 5802045 | 28852.3 |
| phenylacetate-coa oxygenase | APR52_26865 | P76078 | Negative | 5802056 - 5802352 | 11384.5 |
| phenylacetate-coa oxygenase | APR52_26870 | P76077 | Negative | 5802349 - 5803356 | 38033.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
