Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter atp-binding protein | APR52_26775 | A5VU86 | Positive | 5781678 - 5782655 | 35326.8 |
| amino acid deaminase | APR52_26780 | Not Available | Positive | 5782652 - 5783959 | 47020.2 |
| rpir family transcriptional regulator | APR52_26785 | Q8RD36 | Positive | 5783971 - 5784882 | 32155.6 |
| d-aminoacylase | APR52_26790 | Not Available | Positive | 5784879 - 5786354 | 53051.8 |
| hypothetical protein | APR52_26795 | P0AEC2 | Positive | 5786613 - 5788178 | 55993.3 |
| flavin reductase | APR52_26800 | P76121 | Positive | 5788236 - 5788850 | 22090.3 |
| hypothetical protein | APR52_26805 | Not Available | Negative | 5788964 - 5789764 | 28366.8 |
| cytochrome c | APR52_26810 | Not Available | Negative | 5789838 - 5790758 | 32404.4 |
| isoprenylcysteine carboxyl methyltransferase | APR52_26815 | Not Available | Negative | 5790963 - 5791526 | 20791.8 |
| 2-deoxy-d-gluconate 3-dehydrogenase | APR52_26820 | T2KLZ8 | Negative | 5791683 - 5792441 | 25735.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
