Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prevent-host-death protein | APR52_26475 | Not Available | Negative | 5706594 - 5706869 | 10046.0 |
| co2+/mg2+ efflux protein apag | APR52_26480 | A1W2Y8 | Positive | 5706969 - 5707364 | 14044.7 |
| recombinase | APR52_26485 | Not Available | Positive | 5707443 - 5709419 | 71500.0 |
| sodium:proton exchanger | APR52_26490 | Not Available | Positive | 5709416 - 5710690 | 44396.6 |
| gamma-glutamyl ligase | APR52_26495 | A1VTI2 | Positive | 5710759 - 5711907 | 43389.7 |
| thiamine monophosphate kinase | APR52_26500 | P55881 | Positive | 5711946 - 5712920 | 33427.9 |
| lysr family transcriptional regulator | APR52_26505 | O32255 | Negative | 5712934 - 5713830 | 32586.7 |
| abc transporter substrate-binding protein | APR52_26510 | Not Available | Positive | 5713932 - 5714945 | 34296.9 |
| monooxygenase | APR52_26515 | Not Available | Positive | 5714957 - 5716663 | 62440.5 |
| mfs transporter | APR52_26520 | P9WJX2 | Negative | 5716660 - 5718129 | 49062.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
