Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | APR52_26415 | Not Available | Negative | 5694068 - 5694829 | 27087.9 |
| branched-chain amino acid abc transporter permease | APR52_26420 | Not Available | Negative | 5694833 - 5695777 | 32525.3 |
| abc transporter permease | APR52_26425 | Not Available | Negative | 5695774 - 5696646 | 29310.0 |
| abc transporter substrate-binding protein | APR52_26435 | Not Available | Negative | 5697867 - 5699039 | 41671.5 |
| indolepyruvate oxidoreductase subunit b | APR52_26440 | Not Available | Negative | 5699086 - 5700648 | 56170.8 |
| indolepyruvate ferredoxin oxidoreductase | APR52_26445 | Not Available | Negative | 5700645 - 5702807 | 76723.3 |
| succinylglutamate desuccinylase | APR52_26455 | Not Available | Negative | 5703977 - 5704963 | 35313.0 |
| hypothetical protein | APR52_26460 | Not Available | Positive | 5705141 - 5705404 | 9574.75 |
| ribulose phosphate epimerase | APR52_26465 | P44756 | Negative | 5705424 - 5706113 | 24375.2 |
| twitching motility protein pilt | APR52_26470 | Not Available | Negative | 5706110 - 5706589 | 17506.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
