Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_26365 | Not Available | Negative | 5682515 - 5683717 | 43719.2 |
| hypothetical protein | APR52_26370 | Not Available | Negative | 5683724 - 5684827 | 40287.6 |
| amidohydrolase | APR52_26375 | Not Available | Negative | 5684862 - 5685740 | 32565.1 |
| hypothetical protein | APR52_26380 | O05151 | Negative | 5685772 - 5686566 | 27734.8 |
| hypothetical protein | APR52_26385 | Not Available | Positive | 5686697 - 5687587 | 32639.8 |
| hydroperoxidase | APR52_26390 | P95539 | Negative | 5687594 - 5689798 | 80789.7 |
| transglutaminase | APR52_26395 | Not Available | Positive | 5690277 - 5691104 | 30318.3 |
| hypothetical protein | APR52_26400 | Q9EXL7 | Positive | 5691352 - 5692248 | 33421.8 |
| mandelate racemase | APR52_26405 | P11444 | Negative | 5692252 - 5693346 | 38873.4 |
| abc transporter atp-binding protein | APR52_26410 | Not Available | Negative | 5693361 - 5694071 | 24775.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
