Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR52_26315 | Not Available | Positive | 5664080 - 5665081 | 34061.0 |
| histidine kinase | APR52_26320 | Q2T0V9 | Positive | 5665078 - 5667042 | 68923.2 |
| hypothetical protein | APR52_26325 | Not Available | Positive | 5667065 - 5667862 | 29509.9 |
| hypothetical protein | APR52_26330 | Not Available | Negative | 5667820 - 5669508 | 63353.4 |
| hypothetical protein | APR52_26335 | Not Available | Positive | 5669586 - 5670440 | 30488.7 |
| hypothetical protein | APR52_26340 | Not Available | Negative | 5670437 - 5676016 | 181799.0 |
| peptide abc transporter permease | APR52_26345 | Q4QNS5 | Negative | 5676019 - 5677734 | 61740.1 |
| hypothetical protein | APR52_26350 | Not Available | Negative | 5677993 - 5680134 | 77139.0 |
| porin | APR52_26355 | Not Available | Negative | 5680264 - 5681301 | 36908.7 |
| hypothetical protein | APR52_26360 | P27103 | Negative | 5681419 - 5682261 | 30082.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
