Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | APR52_26145 | Not Available | Positive | 5626477 - 5627232 | 26041.2 |
| oxidoreductase | APR52_26150 | O33730 | Negative | 5627305 - 5628213 | 31403.6 |
| merr family transcriptional regulator | APR52_26155 | Not Available | Positive | 5628317 - 5628802 | 17965.7 |
| mfs transporter | APR52_26160 | Not Available | Positive | 5628799 - 5630349 | 55546.2 |
| type iv pili twitching motility protein pilt | APR52_26165 | G3XCX3 | Negative | 5630484 - 5631620 | 41812.4 |
| type iv pili twitching motility protein pilt | APR52_26170 | P24559 | Negative | 5631647 - 5632690 | 38252.3 |
| hypothetical protein | APR52_26175 | P24562 | Positive | 5632742 - 5633443 | 24668.8 |
| arsr family transcriptional regulator | APR52_26180 | P0A2S0 | Negative | 5633454 - 5633921 | 17506.3 |
| integrase | APR52_26185 | P09546 | Positive | 5634033 - 5637008 | 105612.0 |
| hypothetical protein | APR52_26190 | Not Available | Negative | 5637037 - 5637507 | 16400.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
