Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR52_26045 | Not Available | Negative | 5600217 - 5601137 | 31770.7 |
| abc transporter substrate-binding protein | APR52_26050 | Not Available | Negative | 5601304 - 5602497 | 42231.4 |
| atp synthase f0f1 subunit c | APR52_26055 | B1Y3T2 | Negative | 5602733 - 5602972 | 8158.17 |
| hypothetical protein | APR52_26060 | Q56072 | Negative | 5603067 - 5603954 | 32155.2 |
| abc-atpase uvra | APR52_26065 | Q9JUS4 | Negative | 5604017 - 5607112 | 113344.0 |
| chloride channel protein | APR52_26070 | A8ALD3 | Negative | 5607160 - 5608527 | 47452.4 |
| single-stranded dna-binding protein | APR52_26075 | P59927 | Positive | 5608666 - 5609199 | 18811.9 |
| hypothetical protein | APR52_26080 | Not Available | Negative | 5609275 - 5611086 | 63265.1 |
| trehalose utilization | APR52_26085 | Not Available | Positive | 5611998 - 5613002 | 35840.8 |
| dehydrogenase | APR52_26090 | Not Available | Positive | 5613121 - 5615337 | 77712.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
