Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| receptor | APR52_25940 | Not Available | Positive | 5578901 - 5579875 | 33894.4 |
| hypothetical protein | APR52_25945 | Not Available | Positive | 5579872 - 5581224 | 47609.8 |
| palmitoyl-coa hydrolase | APR52_25950 | P0AGG3 | Positive | 5581525 - 5582418 | 32921.5 |
| short-chain dehydrogenase | APR52_25960 | Not Available | Positive | 5583285 - 5584064 | 26603.8 |
| receptor | APR52_25965 | Not Available | Positive | 5584124 - 5585335 | 43232.3 |
| abc transporter permease | APR52_25970 | Not Available | Positive | 5585352 - 5586254 | 31501.1 |
| abc transporter permease | APR52_25975 | Not Available | Positive | 5586257 - 5587222 | 34092.6 |
| abc transporter atp-binding protein | APR52_25980 | Not Available | Positive | 5587219 - 5587995 | 28117.1 |
| abc transporter atp-binding protein | APR52_25985 | Not Available | Positive | 5587988 - 5588707 | 26160.8 |
| 3-oxoacyl-acp reductase | APR52_25990 | Not Available | Positive | 5588736 - 5589485 | 25768.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
