Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase hflx | APR52_25840 | P25519 | Negative | 5559315 - 5560484 | 43131.6 |
| rna-binding protein | APR52_25845 | C5CXH1 | Negative | 5560543 - 5560788 | 9059.87 |
| ribosome-associated gtpase enga | APR52_25850 | C5CXH0 | Negative | 5560950 - 5562296 | 49639.6 |
| outer membrane protein assembly factor bamb | APR52_25855 | C6BGE7 | Negative | 5562347 - 5563489 | 39216.8 |
| hypothetical protein | APR52_25860 | Not Available | Negative | 5563502 - 5564194 | 25286.8 |
| histidine--trna ligase | APR52_25865 | B9MFX7 | Negative | 5564284 - 5565621 | 48303.2 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | APR52_25870 | P58669 | Negative | 5565635 - 5566912 | 46031.4 |
| hypothetical protein | APR52_25875 | Not Available | Negative | 5566906 - 5567856 | 31744.4 |
| pilus assembly protein pilw | APR52_25880 | Not Available | Negative | 5567849 - 5568700 | 31030.5 |
| 23s rrna (adenine(2503)-c2)-methyltransferase | APR52_25885 | A1TM24 | Negative | 5568705 - 5569880 | 43167.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
