Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | APR52_25790 | Not Available | Positive | 5549219 - 5549680 | 16287.7 |
| hypothetical protein | APR52_25795 | Q54MG1 | Positive | 5549727 - 5552024 | 80486.4 |
| arac family transcriptional regulator | APR52_25800 | Not Available | Positive | 5552026 - 5552910 | 31208.5 |
| glyxoylase | APR52_25805 | Not Available | Positive | 5552972 - 5553430 | 16935.0 |
| nicotinate phosphoribosyltransferase | APR52_25810 | Not Available | Negative | 5553498 - 5554022 | 19693.6 |
| adenylosuccinate synthetase | APR52_25815 | C5CXH7 | Negative | 5554113 - 5555444 | 47900.6 |
| atp phosphoribosyltransferase regulatory subunit | APR52_25820 | C5CXH6 | Negative | 5555466 - 5556626 | 41607.0 |
| hypothetical protein | APR52_25825 | Not Available | Negative | 5556745 - 5556933 | 6870.68 |
| hypothetical protein | APR52_25830 | P44545 | Negative | 5556962 - 5557855 | 33631.3 |
| hypothetical protein | APR52_25835 | P40605 | Negative | 5557876 - 5559240 | 49205.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
