Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | APR52_25740 | Q9HUU7 | Negative | 5542404 - 5542925 | 18774.3 |
| transcriptional regulator | APR52_25745 | Not Available | Positive | 5542980 - 5543588 | 22109.6 |
| lysr family transcriptional regulator | APR52_25750 | Not Available | Positive | 5543681 - 5543854 | 5949.57 |
| 23s rrna methyltransferase | APR52_25755 | Q8Y016 | Negative | 5543871 - 5544617 | 26092.4 |
| hypothetical protein | APR52_25760 | Not Available | Negative | 5544664 - 5545647 | 36426.6 |
| hypothetical protein | APR52_25765 | Not Available | Negative | 5545653 - 5546126 | 16789.3 |
| abc transporter | APR52_25770 | P0A9T9 | Negative | 5546167 - 5546877 | 25316.5 |
| arylesterase | APR52_25775 | Not Available | Positive | 5546893 - 5547546 | 22971.8 |
| hypothetical protein | APR52_25780 | Not Available | Negative | 5547653 - 5547856 | 7506.81 |
| cystathionine beta-lyase | APR52_25785 | Not Available | Negative | 5547942 - 5549138 | 43053.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
