Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | APR52_01895 | A1WJ05 | Negative | 404315 - 404854 | 20044.1 |
| flagellar transcriptional regulator flhd | APR52_01900 | A1W9V0 | Negative | 404883 - 405215 | 12436.0 |
| flagellin | APR52_01905 | P53606 | Positive | 405840 - 407003 | 38900.1 |
| hypothetical protein | APR52_01910 | Q9K3C5 | Positive | 407131 - 408579 | 48826.0 |
| flagellar export chaperone flis | APR52_01915 | P26609 | Positive | 408660 - 409076 | 14404.2 |
| flagellar export protein flij | APR52_01920 | Not Available | Positive | 409096 - 409395 | 11614.1 |
| flagellar hook-basal body protein flie | APR52_01925 | Not Available | Negative | 409469 - 409786 | 11012.2 |
| flagellar m-ring protein flif | APR52_01930 | P25798 | Positive | 409947 - 411683 | 60336.5 |
| flagellar motor switch protein g | APR52_01935 | P0A1K0 | Positive | 411699 - 412691 | 35582.1 |
| hypothetical protein | APR52_01940 | Not Available | Positive | 412735 - 413412 | 23448.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
