Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | APR52_25530 | Not Available | Negative | 5502834 - 5503553 | 28068.6 |
| molybdopterin dehydrogenase | APR52_25540 | Not Available | Positive | 5504318 - 5505187 | 31154.6 |
| (2fe-2s)-binding protein | APR52_25545 | O87682 | Positive | 5505187 - 5505720 | 18609.1 |
| carbon monoxide dehydrogenase | APR52_25550 | D7REY3 | Positive | 5505717 - 5508104 | 85820.2 |
| abc transporter substrate-binding protein | APR52_25555 | Not Available | Positive | 5508179 - 5509423 | 44555.1 |
| abc transporter permease | APR52_25560 | Not Available | Positive | 5509434 - 5510306 | 30557.0 |
| abc transporter permease | APR52_25565 | Not Available | Positive | 5510374 - 5511357 | 34812.3 |
| abc transporter atp-binding protein | APR52_25570 | Not Available | Positive | 5511363 - 5512121 | 27859.6 |
| abc transporter atp-binding protein | APR52_25575 | Not Available | Positive | 5512139 - 5512843 | 25842.9 |
| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase | APR52_25580 | Not Available | Negative | 5512861 - 5513715 | 30247.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
