Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| myristoyl transferase | APR52_25480 | Not Available | Positive | 5492730 - 5493845 | 39930.7 |
| abc transporter atp-binding protein | APR52_25485 | Not Available | Positive | 5493857 - 5494669 | 29949.4 |
| abc transporter permease | APR52_25490 | Not Available | Positive | 5494717 - 5495499 | 28157.2 |
| abc transporter substrate-binding protein | APR52_25495 | Not Available | Positive | 5495702 - 5496517 | 28257.7 |
| hypothetical protein | APR52_25500 | Not Available | Positive | 5496635 - 5497426 | 28398.5 |
| aliphatic sulfonate abc transporter substrate-binding protein | APR52_25505 | Not Available | Negative | 5497423 - 5498406 | 34966.2 |
| 4fe-4s ferredoxin | APR52_25510 | Not Available | Negative | 5498406 - 5498735 | 11877.1 |
| pyridine nucleotide-disulfide oxidoreductase | APR52_25515 | Not Available | Negative | 5498732 - 5500363 | 57783.1 |
| hypothetical protein | APR52_25520 | Not Available | Negative | 5500475 - 5501656 | 39979.3 |
| thiosulfate sulfurtransferase | APR52_25525 | P16385 | Negative | 5501763 - 5502713 | 34571.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
