Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_25430 | Not Available | Negative | 5482993 - 5483277 | 9473.06 |
| hypothetical protein | APR52_25435 | Not Available | Negative | 5483291 - 5484790 | 52426.1 |
| glycogen debranching protein | APR52_25440 | P0A4Y5 | Negative | 5485000 - 5487093 | 77231.4 |
| hypothetical protein | APR52_25445 | Not Available | Positive | 5487353 - 5487622 | 9867.86 |
| hypothetical protein | APR52_25450 | Not Available | Negative | 5487657 - 5487944 | 10312.0 |
| biotin biosynthesis protein bioc | APR52_25455 | Q2KBP7 | Positive | 5488148 - 5488726 | 19600.8 |
| o-succinylbenzoate--coa ligase | APR52_25460 | O07619 | Positive | 5488726 - 5490132 | 50602.4 |
| acetyl-coa acetyltransferase | APR52_25465 | P50174 | Positive | 5490129 - 5491292 | 38870.0 |
| oxidoreductase | APR52_25470 | Not Available | Negative | 5491303 - 5492022 | 25652.8 |
| hypothetical protein | APR52_25475 | Not Available | Positive | 5492151 - 5492594 | 16116.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
