Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_25380 | Not Available | Negative | 5472387 - 5473115 | 26664.2 |
| isocitrate dehydrogenase | APR52_25385 | Q945K7 | Negative | 5473141 - 5474172 | 36477.4 |
| hypothetical protein | APR52_25390 | Not Available | Negative | 5474285 - 5474713 | 16047.0 |
| methionine--trna ligase | APR52_25395 | Q12F12 | Positive | 5474781 - 5476877 | 76691.4 |
| hypothetical protein | APR52_25400 | Not Available | Positive | 5476907 - 5477125 | 6756.17 |
| hypothetical protein | APR52_25405 | Not Available | Negative | 5477149 - 5477901 | 26403.3 |
| amidase | APR52_25410 | P13398 | Positive | 5478041 - 5479474 | 49332.0 |
| hypothetical protein | APR52_25415 | Not Available | Negative | 5479479 - 5480420 | 32733.9 |
| hypothetical protein | APR52_25420 | Not Available | Negative | 5480626 - 5481822 | 43205.2 |
| hypothetical protein | APR52_25425 | Not Available | Negative | 5481809 - 5482996 | 41865.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
