Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_25330 | Not Available | Positive | 5463762 - 5464025 | 9654.36 |
| hypothetical protein | APR52_25335 | Not Available | Positive | 5464037 - 5464669 | 22657.0 |
| trna-thr(ggu) m(6)t(6)a37 methyltransferase tsaa | APR52_25340 | Q9V0X6 | Negative | 5464666 - 5465163 | 18378.1 |
| mode family transcriptional regulator | APR52_25345 | Q08386 | Negative | 5465160 - 5465507 | 12154.8 |
| hypothetical protein | APR52_25350 | Not Available | Positive | 5465677 - 5466252 | 19417.4 |
| mfs transporter | APR52_25355 | Not Available | Negative | 5466287 - 5467978 | 59598.9 |
| lysr family transcriptional regulator | APR52_25360 | Not Available | Negative | 5468119 - 5469066 | 34050.7 |
| atp-binding protein | APR52_25365 | P72190 | Negative | 5469278 - 5470369 | 38099.3 |
| patatin | APR52_25370 | Not Available | Positive | 5470446 - 5471663 | 43112.0 |
| hypothetical protein | APR52_25375 | Q47D77 | Negative | 5471675 - 5472355 | 24088.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
