Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate abc transporter permease | APR52_25280 | O69064 | Positive | 5453644 - 5454438 | 27718.6 |
| trna 2-selenouridine synthase | APR52_25285 | Q82WE9 | Positive | 5454637 - 5455707 | 39451.5 |
| formate dehydrogenase family accessory protein fdhd | APR52_25290 | Q62MN2 | Negative | 5455641 - 5456513 | 30405.8 |
| hypothetical protein | APR52_25295 | Not Available | Negative | 5456611 - 5456907 | 10077.1 |
| cbbbc protein | APR52_25300 | Not Available | Negative | 5456922 - 5459279 | 86596.9 |
| lysr family transcriptional regulator | APR52_25305 | Not Available | Negative | 5459391 - 5460305 | 32439.4 |
| nmra family transcriptional regulator | APR52_25310 | Not Available | Positive | 5460415 - 5461275 | 30678.1 |
| abc transporter atp-binding protein | APR52_25315 | Q2W1R8 | Negative | 5461282 - 5462073 | 28747.6 |
| molybdate abc transporter substrate-binding protein | APR52_25320 | Q8PHA1 | Negative | 5462070 - 5462834 | 26758.1 |
| molybdenum abc transporter permease | APR52_25325 | O32209 | Negative | 5462853 - 5463536 | 24413.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
