Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_25230 | B5XZH9 | Positive | 5442160 - 5443176 | 37060.4 |
| l-seryl-trna(sec) selenium transferase | APR52_25235 | Q02FL3 | Positive | 5443176 - 5444624 | 50799.1 |
| acyl-coa dehydrogenase | APR52_25240 | Not Available | Positive | 5444656 - 5445771 | 38604.3 |
| hypothetical protein | APR52_25245 | Not Available | Positive | 5445803 - 5446642 | 30650.3 |
| hypothetical protein | APR52_25250 | Not Available | Positive | 5446608 - 5447813 | 43679.1 |
| selenocysteine-specific elongation factor | APR52_25255 | P14081 | Positive | 5447824 - 5449731 | 68382.2 |
| selenide, water dikinase | APR52_25260 | B1Z181 | Negative | 5449989 - 5451041 | 36204.0 |
| phosphonate abc transporter substrate-binding protein | APR52_25265 | A3PC74 | Positive | 5451131 - 5451988 | 30547.7 |
| phosphonate abc transporter | APR52_25270 | Q0K4I1 | Positive | 5452011 - 5452823 | 28420.6 |
| abc transporter permease | APR52_25275 | A0QQ68 | Positive | 5452820 - 5453647 | 28723.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
