Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_01840 | Not Available | Positive | 392734 - 393114 | 13791.4 |
| hypothetical protein | APR52_01845 | Q8XB94 | Negative | 393124 - 394047 | 33942.7 |
| lysr family transcriptional regulator | APR52_01850 | Not Available | Negative | 394066 - 394986 | 33285.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | APR52_01855 | B2IDU5 | Positive | 395055 - 396092 | 36098.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | APR52_01860 | Not Available | Positive | 396089 - 396760 | 23237.2 |
| flagellar biosynthesis sigma factor | APR52_01865 | P0AEM8 | Negative | 396793 - 397515 | 26883.4 |
| flagellar biosynthesis protein flhf | APR52_01870 | Q9I3P8 | Negative | 397568 - 399034 | 51115.7 |
| flagellar biosynthesis protein flha | APR52_01875 | Q56887 | Negative | 399031 - 401058 | 72085.0 |
| flagellar biosynthetic protein flhb | APR52_01880 | P40727 | Negative | 401100 - 402278 | 41618.8 |
| flagellar motor stator protein mota | APR52_01890 | P55891 | Negative | 403339 - 404196 | 30503.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
